Release Notes for Cocaine Dependence

Introduction

Distribution 2.1 of the NIDA Cocaine Dependence Genetics Initiative contains 2163 subjects in 881 families from Studies 7 and 13, counting dummy connector records.  N=1279 subjects have blood samples. Distribution 2.1 differs from 2.0 by an updated interview file; all the distribution variables are identical to 2.0.

Distribution 2.2 conformed the data to a common template, no data values were changed.

Distribution 2.3 added plasma_id, no other data values changed.

Distribution 2.4 was updated to standardize the order of columns in the distribution file; also cell_id and DNG were updated.

Notes 

  1. Distribution file.  Obligate No.  Study 13 dependence variables code 2 = “Obligate no” means that the item must be coded “no” because of responses to other items; eg. subject responds “never smoked”, therefore nicotine dependence must be “No”.  Study 7 dependence variables did not distinguish between obligatory “no” and unaffected status.  
  2. Distribution File.  Study 7.  For families with multiple sibs, created dummy connector parent records with father_id = “D11” and mother_id=”D12”.  
  3. Distribution File.  Study 7.  PCP dependence, hallucinogen dependence, and Study 7 Other dependence coded as Other dep.  
  4. Distribution File.  Study 7.  Recoded individual race as follows: ALASKAN NATIVE/ESKIMO/ALEUT, AMERICAN INDIAN  → Others ASIAN OR ASIAN-AMERICAN  → Asian BLACK/AFRICAN AMERICAN  → African-American LATINO OR HISPANIC  → Hispanic MIDDLE EASTERN  → Others PACIFIC ISLANDER  → Asian WHITE, CAUCASIAN, EURO-AMERICAN NOT OF LATINO ORIGIN  → White BIRACIAL OR MULTIRACIAL  → Others OTHER  → Others
  5. Pedigree drawings.  Shading of pedigree symbols.  Full shading = cocaine dependence.  ¾ shading = other illicit drug dep (opioid, stimulant, sedative, marijuana, other), ½ shading = alcohol dep, ¼ shading = tobacco dep.  
  6. Distribution file.  Age for Study 13 is “current age” while Study 7 age was calculated from year of birth and date of Rutgers blood sample.  
  7. Interview file.  Study 7.  Excel workbook is saved in Excel 2007 *.xlsx format.